Nextflow workflow report

[sharp_noether] (resumed run)

Workflow execution completed successfully!
Run times
29-Mar-2024 16:23:22 - 29-Mar-2024 16:46:28 (duration: 23m 5s)
  125 succeeded  
  471 cached  
  0 ignored  
  0 failed  
Nextflow command
nextflow run nf-core/ampliseq -resume -profile singularity --input /work/gmgi/Fisheries/eDNA/offshore_wind2023/metadata/samplesheet.csv --FW_primer ACTGGGATTAGATACCCY...CTAGAGGAGCCTGTTCTA --RV_primer TAGAACAGGCTCCTCTAG...RGGGTATCTAATCCCAGT --outdir ./results --trunclenf 100 --trunclenr 100 --trunc_qmin 25 --max_len 200 --max_ee 2 --sample_inference pseudo --skip_taxonomy --ignore_failed_trimming
CPU-Hours
7.4 (30.3% cached)
Launch directory
/work/gmgi/Fisheries/eDNA/offshore_wind2023
Work directory
/work/gmgi/Fisheries/eDNA/offshore_wind2023/work
Project directory
/home/e.strand/.nextflow/assets/nf-core/ampliseq
Script name
main.nf
Script ID
0e49f19bb235c64bc4734f61f17c80d6
Workflow session
b0b6a9db-cd01-41eb-97d5-a059fa68d145
Workflow repository
https://github.com/nf-core/ampliseq, revision master (commit hash f3c97e1b9088b229d4bcdeb2f9a25f21d6552f8b)
Workflow profile
singularity
Nextflow version
version 23.10.1, build 5893 (12-01-2024 23:26 UTC)

Resource Usage

These plots give an overview of the distribution of resource usage for each process.

CPU

Memory

Job Duration

I/O

Tasks

This table shows information about each task in the workflow. Use the search box on the right to filter rows for specific values. Clicking headers will sort the table by that value and scrolling side to side will reveal more columns.

(tasks table omitted because the dataset is too big)